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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs767471 chr6:26557854 C/T ZNF322B chr9:99957633-99961910:- 0.58 11.4 8.92E-27 Box Plot
THCA rs7675155 chr4:170878904 C/G DBNDD2 chr20:44034697-44039250:+ -0.42 -5.88 7.82E-9 Box Plot
THCA rs76757413 chr2:132202453 G/C CCDC74B chr2:130896860-130902707:- 0.37 6.65 8.06E-11 Box Plot
THCA rs76776545 chr2:132210879 G/A CCDC74B chr2:130896860-130902707:- 0.38 6.84 2.4E-11 Box Plot
THCA rs76820856 chr15:31000057 A/G CHRNA7 chr15:32215641-32465219:+ 0.3 7.06 5.84E-12 Box Plot
THCA rs76830520 chr5:170820630 ACTT/A CLEC2D chr12:9817565-9852151:+ -0.2 -6.42 3.2E-10 Box Plot
THCA rs7684117 chr4:173873598 T/A GALNTL6 chr4:172733405-173962710:+ 0.51 11.78 2.76E-28 Box Plot
THCA rs76882281 chr2:132200114 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs76890961 chr5:18427190 G/A GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs76909525 chr2:113008600 A/C RGPD5 chr2:110550335-110615272:+ -0.46 -6.6 1.11E-10 Box Plot
THCA rs76914923 chr11:60202343 C/T PRDM6 chr5:122424816-122529960:+ 0.58 5.87 8.01E-9 Box Plot
THCA rs7691656 chr4:24697309 G/T KIAA0467 chr1:43855556-43918304:+ -0.15 -5.88 7.82E-9 Box Plot
THCA rs7692136 chr4:150844895 T/G B4GALT4 chr3:118930579-118959950:- -0.65 -5.98 4.39E-9 Box Plot
THCA rs76939088 chr6:26610996 C/T ZNF322B chr9:99957633-99961910:- -0.61 -7.23 1.88E-12 Box Plot
THCA rs7695241 chr4:185792083 T/A PRDM11 chr11:45117357-45256661:+ -0.2 -5.91 6.44E-9 Box Plot